Peer-reviewed (* graduate, ** undergraduate coauthors)
  1. Stauffer, BA, HA Bowers, E Buckley, TW Davis, TH Johengen, R Kudela, MA Mcmanus, H Purcell, GJ Smith, A Vander Woude, MN Tamburri. (2019) Considerations in Harmful Algal Bloom Research and Monitoring: Perspectives From a Consensus-Building Workshop and Technology Testing. Frontiers in Marine Science 6. (link)
  2. Stauffer BA, AG Gellene, D Rico**, C Sur**, DA Caron. 2017. Grazing of the heterotrophic dinoflagellate Noctiluca scintillans on dinoflagellate and raphidophyte prey. Aquatic Microbial Ecology 80: 193-207. (link)
  3. Pellerin, BA, BA Stauffer, DA Young, DJ Sullivan, SB Bricker, MR Walbridge, GA Clyde, DM Shaw. 2016. Emerging Tools for Continuous Nutrient Monitoring Networks: Sensors Advancing Science and Water Resources Protection.  Journal of the American Water Resources Association 52(4): 993-1008, Open Water Data Initiative Feature Collection
  4. Stauffer, BA, J Miksis-Olds, JI Goes. 2015 Cold regime interannual variability of primary and secondary producer community composition in the southeastern Bering Sea. PLOS ONE 10(6): e0131246. (pdf)
  5. Stauffer, BA, CJ Patrick, KL Robinson, H Peter. 2014. Temporal scales of drivers of community dynamics: from microbes to macrofauna across the salinity gradient. In: PF Kemp (Ed.) Eco-DAS X Symposium Proceedings, Waco, TX: Association for the Sciences of Limnology and Oceanography, 14-24 (pdf)
  6. Stauffer, BA, JI Goes, HR Gomes, PJ Stabeno. 2014. Interannual variability of spring-time phytoplankton community composition in the western Gulf of Alaska and southeastern Bering Sea. Deep Sea Research II 109: 57-70. (pdf)
  7. Stauffer, BA, A Schnetzer, AG Gellene, C Oberg, GS Sukhatme, DA Caron. 2013. Effects of an acute hypoxic event on microplankton community structure in a coastal harbor of Southern California. Estuaries and Coasts 36: 135-148. (pdf)
  8. Stauffer, BA, AG Gellene, A Schnetzer, EL Seubert, C Oberg, GS Sukhatme, DA Caron. 2012. An oceanographic, meteorological and biological 'perfect storm' yields a massive fish kill. Marine Ecology Progress Series 468: 231-243. (pdf)
  9. Golubchik, L, D Caron, A Das, A Dhariwal, R Govindan, D Kempe, C Oberg, A Sharma, B Stauffer, G Sukhatme, B Zhang. 2011. AMBROSia: An Overview and Recent Results. Journal of Algorithms & Computational Technology 5 (4): 583-600.
  10. Smith, RN, J Das, H Heidarsson, A A. de Menezes Pereira, F Arrichiello, I Cetinic, L Darjany, ME Garneau, MD Howard, C Oberg, M Ragan, E Seubert, B Stauffer, A Schnetzer, G Toro-Farmer, DA Caron, BH. Jones, GS Sukhatme. 2010. USC CINAPS Builds Bridges: Observing and Monitoring the Southern California Bight. IEEE Robotics and Automation Magazine 17 (1): 20-30. (pdf)
  11. Ishikawa, F. N., BA Stauffer, DA Caron, C Zhou. 2009. Rapid and Label-Free Cell Detection by Metal-Cluster-Decorated Carbon Nanotube Biosensors. Biosensors and Bioelectronics. 24 (10): 2967-2972. (pdf)
  12. Stauffer, BA, RA Schaffner, C Wazniak, DA Caron. 2008. An immunofluorescent flow cytometric technique for counting the brown tide alga, Aureococcus anophagefferens. Applied & Environmental Microbiology 74(22):6931-40. (pdf)
  13. Caron, DA, BA Stauffer, SD Moorthi, A Singh, M Batalin, E Graham, M Hansen, WJ Kaiser, J Das, A Pereira, A Dhariwal, B Zhang, C Oberg, GS Sukhatme. 2008. Macro- to fine-scale spatial and temporal distributions and dynamics of phytoplankton and their environmental driving forces in a small subalpine lake in southern California, USA. Limnology and Oceanography 53: 2333-2349. (pdf)
  14. Stauffer, BA, GS Sukhatme, C Oberg, B Zhang, A Dhariwal, A Requicha, DA Caron. 2008. Use of embedded networked sensors for the study of cyanobacterial bloom dynamics. In: Cyanobacterial Harmful Algal Blooms: State of the Science and Research Needs, HK Hudnell (ed.). Advances in Experimental Medicine and Biology 619: 176-177.
  15. Singh, A, M Batalin, MJ Stealey, B Zhang, A Dhariwal, B Stauffer, S Moorthi, C Oberg, A Pereira, V Chen, Y Lam, D Caron, M Hansen, WJ Kaiser, G Sukhatme. 2007. Human Assisted Robotic Team Campaigns for Aquatic Monitoring. Journal of Field Robotics 24 (11-12): 969-989.
  16. Sukhatme, GS, A Dhariwal, B Zhang, C Oberg, BA Stauffer, DA Caron. 2007. Design and Development of a Wireless Robotic Networked Aquatic Microbial Observing System. Environmental Engineering Science 24 (2): 205-215.
  17. Schnetzer, A,  PE Miller, RA Schaffner, BA Stauffer, BH Jones, SB Weisberg, PM DiGiacomo, WM Berelson, DA Caron. 2007. Blooms of Pseudo-nitzschia and domoic acid in the San Pedro Channel and Los Angeles harbor areas of the Southern California Bight, 2003–2004. Harmful Algae 6 (3): 372-387. (pdf)
  18. D Caron, A Das, A Dhariwal, L Golubchik, R Govindan, D Kempe, C Oberg, A Sharma, B Stauffer, G Sukhatme, B Zhang. 2007. AMBROSia: An Autonomous Model-Based Reactive Observing System. Lecture Notes in Computer Science 4487: 995-1001.
  19. Moorthi, SD, PD Countway, BA Stauffer, DA Caron. 2006. Use of quantitative real-time PCR to investigate the dynamics of the red tide dinoflagellate Lingulodinium polyedrum.  Microbial Ecology 52 (1): 136-150. (pdf)
  20. Golubchik, L, D Caron, A Das, A Dhariwal, R Govindan, D Kempe, C Oberg, A Sharma, B Stauffer, G Sukhatme, B Zhang. 2006. A generic multi-scale modeling framework for reactive observing systems: An overview. Computational Science – ICCS, Part 3, Proceedings Lecture Notes in Computer Science 3993: 514-521.
  21. Lee, AS, M Mahapatro, DA Caron, AAG Requicha, BA Stauffer, ME Thompson, CW Zhou. 2006. Whole-cell sensing for a harmful bloom-forming microscopic alga by measuring antibody-antigen forces. IEEE Transactions on Nanobioscience 5 (3): 149-156. (pdf)

 Other
  1. Barbero, L., Pierrot, D., Wanninkhof, R., Baringer, M., Hooper, J., Zhang, J. Z., Smith, R., Byrne, R., Langdon, C., Hernández-Ayón, M., Schnetzer, A., Stauffer, B., Herzka, S., Cano-Compairé, J., Hernández, F., Pech, D., Hu, C., English, D., Ondrusek, M., Olascoaga, J., and Derr, G.: Third Gulf of Mexico Ecosystems and Carbon Cycle (GOMECC-3) Cruise, https://doi.org/10.25923/y6m9-fy08, 2019.
  2. Stauffer, BA. 2014. Technical Considerations in the Design and Execution of Sensor Journalism Campaigns. In F. Pitt (Ed.) Sensors and Journalism. New York, NY: Columbia Journalism School. (pdf)
  3. Hansen, GA, S Sadro, M Baustian, BA Stauffer. 2014. Shifting career pathways of ecologists: Is it time to redefine the "alternative" career? ASLO Bulletin 23 (1): 2-5. (pdf)

Media Coverage
“Coastal research dead under Trump budget” KATC report, March 2017 

“The Challenge: Track Nutrients in Water to Protect Health.” Kat Song. 2015. AAAS Science & Technology Policy Fellowship News.

“Innovating to Protect our Waterways.” Tamara Dickinson. 2014. White House Office of Science & Technology Policy Blog.

"Monitoring network offers rare insight into King Harbor fish kill." Jeff Gillies. 2013. Fondriest Environmental Monitor.

"Dead Redondo Beach fish are a scientist's treasure." Melissa Pamer. 2011. Daily Breeze.

"A Little Urban Harbor Reveals Big Mysteries." Charlotte Stevenson. 2011. USC SeaGrant Urban Mariner.